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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7268555, gi|7...
Protein type: Globular with Signal Peptide
Type Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSKHNPPGN NRSRSTLSLL VVVGLCCFFY LLGAWQKSGF GKGDSIAMEI TKQAQCTDIV  60
   61 TDLDFEPHHN TVKIPHKADP KPVSFKPCDV KLKDYTPCQE QDRAMKFPRE NMIYRERHCP 120
  121 PDNEKLRCLV PAPKGYMTPF PWPKSRDYVH YANAPFKSLT VEKAGQNWVQ FQGNVFKFPG 180
  181 GGTMFPQGAD AYIEELASVI PIKDGSVRTA LDTGCGVSRF LFDLVASWGA YMLKRNVLTM 240
  241 SFAPRDNHEA QVQFALERGV PAIIAVLGSI LLPYPARAFD MAQCSRCLIP WTANEGTYLM 300
  301 EVDRVLRPGG YWVLSGPPIN WKTWHKTWNR TKAELNAEQK RIEGIAESLC WEKKYEKGDI 360
  361 AIFRKKINDR SCDRSTPVDT CKRKDTDDVW YKEIETCVTP FPKVSNEEEV AGGKLKKFPE 420
  421 RLFAVPPSIS KGLINGVDEE SYQEDINLWK KRVTGYKRIN RLIGSTRYRN VMDMNAGLGG 480
  481 FAAALESPKS WVMNVIPTIN KNTLSVVYER GLIGIYHDWC EGFSTYPRTY DFIHASGVFS 540
  541 LYQHSCKLED ILLETDRILR PEGIVIFRDE VDVLNDVRKI VDGMRWDTKL MDHEDGPLVP 600
  601 EKILVATKQY WVAGDDGNNS PSSSNSEEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle