YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HR1_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLVELLTSA ALGLSLQLLH DAIIRAKERS LITRCILDRL DATLHKITPF VIKIDTLTEE  60
   61 VDEPFRKVIE ELKRLLEKAI RLVDAYAELK LRNLLRKYRY KRRIKELDSS LRWMIDVDVQ 120
  121 VNQWLDIKKL MGKMSEMNTK LDDITRQPMD IIEATGRSSE EDGCTKPTID IHFRWKNQTK 180
  181 EHEIRFIFK

Type	Start	End	Confidence
Signal Peptide	1	22	0.87
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	189	0.98