YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15233504, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLRSLSIW FFFFFVFVFL INPSISIRTS FIKLPGSDGS RYCDSWRLAA ETNNVGTWDL  60
   61 IPSICVDSVA EYLNGDQFLS DYSVIVDYAL AFAKSVEISG DGKDVWIFDI DETLLTNIDY 120
  121 YKAHGYGSEP YDDNKFSEWV EQGTAPAFDA SLRLYNALKK LGFTIILLTG RDEHQRTSTE 180
  181 TNLRDAGYSG WERLLLRGPN DQGKSATNYK SEQRSKLIEE GFKIRGNSGD QWSDLQGFAV 240
  241 ADRSFKVPNP MYYIP

Type	Start	End	Confidence
Cytoplasmic	1	6	0.66
Transmembrane Helix	7	27	0.68
Non-Cytoplasmic	28	255	0.92