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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACCR2_ARATH
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.78
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQPNSHIFVI ITISSLIITV SAYGSTGTIA AAFGENGFFC AIDASGKQEV ICWDRGNTNR  60
   61 SLNRPPGEIS GYSPPMTSLS GGEGFLCAIT SNTSRAFCWN LEDPSENLVP RAFQYNSYLQ 120
  121 IASGNNHVCA ISGLYYSGPD YGPVHCWEYS DNTNFTSGLL WNSSFHNPYI DSLMFRKIVS 180
  181 GDGFSCGVTK DGDLVCWGPK SNLLNFSNNE EFEVLASGRN SVCGVSKDSG QLHCFGDETE 240
  241 FGSLPNRPRF IALSAGANHY CGIREDDHGV ECWGRNLNSS SSSSAPNTSG FVAISSSDST 300
  301 TCGVRELDLV LDCWRVHDSS KADYSPPLEL CSPGMCSPRG NCGDGWFAFN ASILKESELT 360
  361 SLCSFHNLNI CLRCGISCLE GYFPSSTCNP NADRVCTPCS LCQNSSCYGI CKIRATKSKE 420
  421 HEQKEQREVR RLVIIIGCSV LGFLVMLIGL SFIPKMTKGS KRDDEERSKM TCCFCFDKNS 480
  481 VEADPDPVPH QSVLLPTAVS LGETKIFRLS ELKDATHGFK EFNELGRGSF GFVYKAVLSD 540
  541 GIHVAVKRAN AATIIHSNNR GFESELEILC KIRHNNIVNL LGYCSEMGER LLVYEYMPHG 600
  601 TLHDHLHGDL SQLDWSMRLK IMLQAARGLD YLHNEVDPPI IHRDVKTSNI LLDGEMCARI 660
  661 ADFGLVSSNE RDSSNSDREG DVYDFGIVLL EILSGRKAID RESDPAGIAE WAVPLIRKGK 720
  721 AAAIIDRNIC LPRNVEPLLK LAELAELAVR ENSNERPNIR NILCFLDLIV KSGLTF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle