YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATL18_ARATH
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.41
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISMLFPRSP LCTAAIVFYT CVCIPLGRLK KNGGDADAHD DDGYNLVGVM FGDKEKEEEI  60
   61 CCPICLVEFE AEDAVTHLPR CAHLFHINCI EPWLLRGHLT CPLCRSFVLA PTPPTQNVNN 120
  121 AHSSSTLYLS IFFFFCIFLH LLGYL

Type	Start	End	Confidence
Cytoplasmic	1	9	0.41
Transmembrane Helix	10	24	0.42
Non-Cytoplasmic	25	123	0.52
Transmembrane Helix	124	144	0.88
Cytoplasmic	145	145	0.56