YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18399662, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASLASLSS LAKAGAPRSL FNRHGSHRLP PPQIIPLASS IKKHITTSFY RRGSSLKNIY  60
   61 ALETSDGAIN VEVDDDEEEE ACELVNGTEV SVDGVEGYLL TAVKNNNGTG LLLLSDVFGF 120
  121 QDSATRDFAY RVACNGYNVL VPDLFRGDPW SKNRPKSEYE EWRRGHDPNR IRQDTTTFTK 180
  181 WMVEEFAAAG ISKKLGVMGF CFGGGRVVDV LATDESGYFS TGVSFYGTRI DSAVAGDVKV 240
  241 PVLFIAGDRD PLCEVKGLYE IEEKIGEGSK VVVYEGRGHG FVHRPETPED DRDAEEAFAL 300
  301 MRNWLHHHLI

Type	Start	End	Confidence
Signal Peptide	1	14	0.85
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	310	0.99