YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7267654, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTKECGNHG GGGGGGGTAC RICGAIIGFI IIVLMTIFLV WIILQPKNPE FILQDTTVYA  60
   61 FNLSQPNLLT SKFQITIASR NRNSNIGIYY DHLHAYASYR NQQITLASDL PPTYQRHKED 120
  121 SVWSPLLYGN QVPIAPFNAV ALGDEQNSGV FTLTICVDGQ VRWKVGTLTI GNYHLHVRCQ 180
  181 AFINQADKAA GVHVGENTVK YTLINKCSVN F

Type	Start	End	Confidence
Cytoplasmic	1	20	0.74
Transmembrane Helix	21	44	0.92
Non-Cytoplasmic	45	211	0.77