YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12083272, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMMVKVKGL IGRFWFGVGG GIVLAIVVVI IGLRGTQKAM SSTFLFSGVV PLRVRSVLTP  60
   61 ANPATDRASM ASSSGAKWAQ KTITLPPLRR GCHLITPKIL KEIREDLSDF NCGLAHVFLQ 120
  121 HTSASLTINE NYDPDVQADT ETFLNRIVPE GNSAPWRHTM EGPDDMPAHI KSSMFGCQLT 180
  181 IPITKGKLSM GTWQGIWLCE HRDAPTARRV VVTLNGI

Type	Start	End	Confidence
Cytoplasmic	1	10	0.88
Transmembrane Helix	11	33	0.92
Non-Cytoplasmic	34	217	0.82