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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25289827, gi|...
Protein type: Transmembrane
Type Confidence: 0.74
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELSSLIVPN NKKHFVVVFI GLVLIFKIAL ITAANEKSQI YTVHLGERQH DDPNIVTESH  60
   61 HDILGPLLGS KKASHESMIY SYRHGFSGFA AKLTSSQARE LSGHPDVVRV TRSKNMKLKT 120
  121 TRVSDYLGLT SAAPTGLLHE TDMGSEAIVG ILDSGIWPDS KSFNDNGLGP IPTRWKGKCV 180
  181 SAEAFNASSC NRKLIGAMYY SKGLESKYNG SFNAAEKGEV MSPLDKIGHG THCASTAVGS 240
  241 FVPDANVLSL AQGTARGSAP RARIASYKVC WNNEECFTPD IVKAIDHAIR DGVDVLSLSL 300
  301 GSEVPVDFEV DRDDFAIAAF HAVMKGIPVV CAGGNDGPEK ETISNVAPWL ITVAATTMDR 360
  361 EYFTPITLGN NITLLVQGLY IGEEVGFTDL LFYDDVTRED MEAGKATGKI LLFFQRANFE 420
  421 DDFAAYAKSK GAVGVIIATQ PTDSIDASTV DIAIAYVDNE LGMDILLYIQ TTKSPIAKIS 480
  481 PTKTFVGRPL ATKVARFSSR GPNSLSPVIL KPDIAAPGSG ILAAVPTGGG YDFMSGTSMS 540
  541 TPVVSGIVAL LRKKRPDWSP AAIRSALVTT ALQTDPSGEP IAAEGSPRKL ADPFDYGGGL 600
  601 VNPVKVADPG LVYDMGHDEY VHYLCSAGYD NTSISKLLGE IYTCPTPIPS MLDVNMPSIT 660
  661 IPYLSEEITI TRTVTNVGPV GSVYKAVIQA PQGINLQVSP ETLEFGSNTN KTTFTVKVST 720
  721 THRANTDYLF GSLTWADNEG HNVRIPLSVR TRVFNFKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle