YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|42571223, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGLVALCRA RASASSSLFN SVIRPAFRNF STGFADTQNK SLVAQMKEEM LHMDINSMIG  60
   61 SSMPLGMMRI GTIIHNIEMN PGQGAKMVRA AGTNAKILKE PAKGKCLIKL PSGDTKWINA 120
  121 KCRATIGTVS NPSHGTKKLY KAGQSRWLGI RPKVRGVAMN PCDHPHGGGE GKSKSSGSRG 180
  181 RTSVSPWGKP CKGGYKSASV KKKKKRLAEA AAKM

Type	Start	End	Confidence
Signal Peptide	1	14	0.52
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	214	0.97