YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15229720, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLKPLRHII HEVNRLKKND IIIPFLRSGD YRSFFNLSLT FTPNRIQLPH QEYYLRLSRM  60
   61 HDVASFCAEL IFGLKGLWRN SCFTLEGISA LPSSLSRIAS SLSVFSKWFT PETIETKEHF 120
  121 SKSRILLIVT IVKLPEFFAK VSLTHHDFAC DMLRSSCLRV LMDLSPMFNA LSTFLATLDV 180
  181 ILCLICFMYP TIQLMICTLY PSLV

Type	Start	End	Confidence
Cytoplasmic	1	169	0.76
Transmembrane Helix	170	192	0.83
Non-Cytoplasmic	193	204	0.62