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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12597813
Protein type: Globular with Signal Peptide
Type Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLYSAIFRG HIRPNAVVGA ASMSGGLVTH SQRSRVLCVK AARGDASSST LGIEWRAANL  60
   61 PYFQRQNSGY GRIAYNDYES SDESDRDVGS SQSQQMAGST LDNIDQWRFK LTMLLRNKED 120
  121 QEVVSRERKD RRDFDHISAL ATRMGLHSRQ YSKIVVISKA PLPNYRPDLD DKRPQREVVL 180
  181 PFGLQSEVDA HLHSFLDQKK TLIPEMPRQN SSESLANGYG NYETPETVMQ NSLARERILR 240
  241 PRSLQLKSKQ QQWVDSPEGQ KMVGFRKTLP AYKEKDALLK AIAANQVVVV SGETGCGKTT 300
  301 QLPQYILESE IEAARGATCS IICTQPRRIS AISVSERVAA ERGEQIGESV GYKVRLEGMR 360
  361 GRDTRLLFCT TGVLLRRLLV DRSLKGVTHV VVDEIHERGM NEDFLLIVLK DLLPRRPDLK 420
  421 LILMSATLNA ELFSSYFGGA PAMHIPGFTY PVRAHFLEDY LETSGYRLTT YNQIDDYGEE 480
  481 KTWKMQKQAQ FKKRKSLISS AVEDALEAAD FKGYNFRTRD SLSCWSPDSI GFNLIENVLC 540
  541 HIVKGERPGA VLVFMTGWDD INSLKNQLEA HSLLGDPNKV LLLACHGSMA SSEQRLIFDR 600
  601 PPEGIRKIVL ATNMAETSIT INDVVYVIDC GKAKETSYDA LNNTPCLLPS WISKAAARQR 660
  661 RGRAGRVMPG ECYHLYPRCV YEAFADYQQP ELLRTPLQSL CLQIKSLGLG SISEFLSRAL 720
  721 QPPEALSVQN AVEYLKIIGA LDDDENLTPL GKNLSMLPVE PKLGKMLILG AIFNCLDPVM 780
  781 TVVAGLSVRD PFLMPFDKKD LAETARSKFS GRDYSDHLTL VRAYNGWKDA ERTHSGYDYC 840
  841 WKNFLSSQTL KAMDSMRKQF FNLLKEASLI DNIEGCSKLS HDEHLVRAII CAGMFPGVCS 900
  901 VVNKEKSITL KTMEDGQVLL YSSSVNGNVP MIPFPWLVFN DKVKVNSVFL RDSTAVSDSV 960
  961 LLLFGDKISS GGFDGHLKML GGYLEFFMKP TLAYTYLSLK RELDELIQNK LVNPKLDIQL1020
 1021 YDKLMTAIRL LVSEDQCEGR FVYGRKALSP TPAKKLKDVG AQLQNSGGEN NKNQLQTLLA1080
 1081 RAGHGSPVYK TRQLKNNQFR SMVTFNGLDF MGKPCGSKKN AEKDAAHEAL LWLQGESKSS1140
 1141 LNDLNHMSML LKKNKSKNHA KASTKWG

YRC Informatics Platform - Version 3.0
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