YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20148411, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLHATVSL PLFSNSNHKK LTCAATLSPP PWKQSRRVIS VSFFLSRLLL LPNDAMAGGL  60
   61 MDKLDKYVKR KKLDPLEAYV PPVILAQLQI QDLEGFLNVE KPEFEACRRQ LRSGPASSLR 120
  121 VNIRAVAQYA SDDGFSKTAT DDVDRCLRAL EELDSLFLRA SRKDSNATVV LMKSQLGTAL 180
  181 TALDSLLQTV PSQVLDKGKA MVEVYRSASE EDAGSDDLES SEIKQLQSIL

Type	Start	End	Confidence
Signal Peptide	1	57	0.63
N-region	1	48
H-region	49	54
C-region	55	57
Cleavage Site	57	58
Non-Cytoplasmic	58	230	0.99