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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: P2C66_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNGVTTLTG CCTGTLAGEI SRRYDVSLVH DGLGHSFCYI RPDLPGVVLP SPESPLRSDH  60
   61 IQETTFRSIS GASVSANPST ALSGALSSDS DCPYSSAVSA SAFESSGNFA SLPLQPVPRG 120
  121 STWQSGPIVN ESGLGSAPFE RRFLSGPIES GLYSGPIEST KKTEKEKPKK IRKKPKSKKN 180
  181 FLTFKTLFAN LISNNNKPRL KKSVIEPING SDSSDSGRLH HEPVITSSRS NENPKSDLEE 240
  241 EDEKQSMNSV LDVQWAQGKA GEDRVHVVVS EDNGWVFVGI YDGFSGPDAP DYLLNNLYTA 300
  301 VQKELNGLLW NDEKLRSLGE NGMTKTGKCS DEEDPESGKE NCPVINNDDA VASGARNQAK 360
  361 SLKWRCEWEK KSNNKTKSDN RCDQKGSNST TTNHKDVLKA LLQALRKTED AYLELADQMV 420
  421 KENPELALMG SCVLVTLMKG EDVYVMNVGD SRAVLGRKPN LATGRKRQKE LERIREDSSL 480
  481 EDKEILMNGA MRNTLVPLQL NMEHSTRIEE EVRRIKKEHP DDDCAVENDR VKGYLKVTRA 540
  541 FGAGFLKQPK WNDALLEMFR IDYIGTSPYI TCSPSLCHHK LTSRDKFLIL SSDGLYEYFS 600
  601 NQEAIFEVES FISAFPEGDP AQHLIQEVLL RAANKFGMDF HELLEIPQGD RRRYHDDVSV 660
  661 IVISLEGRIW RSSM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle