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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ALMTC_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNKVHVGSL EMEEGLSKTK WMVLEPSEKI KKIPKRLWNV GKEDPRRVIH ALKVGLSLTL  60
   61 VSLLYLMEPL FKGIGSNAIW AVMTVVVVLE FSAGATLCKG LNRGLGTLIA GSLAFFIEFV 120
  121 ANDSGKVLRA IFIGTAVFII GAAATYIRFI PYIKKNYDYG VVIFLLTFNL ITVSSYRVDS 180
  181 VINIAHDRFY TIAVGCGICL FMSLLVFPIW SGEDLHKTTV GKLQGLSRSI EACVDEYFEE 240
  241 KEKEKTDSKD RIYEGYQAVL DSKSTDETLA LYANWEPRHT LRCHRFPCQQ YVKVGAVLRQ 300
  301 FGYTVVALHG CLQTEIQTPR SVRALFKDPC VRLAGEVCKA LTELADSISN HRHCSPEILS 360
  361 DHLHVALQDL NSAIKSQPKL FLGSNLHRHN NKHQNGSISN NKHHQRNSSN SGKDLNGDVS 420
  421 LQNTETGTRK ITETGSRQGQ NGAVSLSSFR TDTSALMEYR RSFKNSNSEM SAAGERRMLR 480
  481 PQLSKIAVMT SLEFSEALPF AAFASLLVEM VARLDNVIEE VEELGRIASF KEYDNKRDQT 540
  541 ADDVRCENPA NVTISVGAAE 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle