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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11358140, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPSCASSSS SSASPSLRLS SVTVAVDKAT SELLRTPDWT IIIAICDSLN SNRWQCKDAI  60
   61 KAVKRRLQHK SSRVQLLTLT AMLKNCGDFV HSHIAEKHLL EDMVKLVRKK GDFEVRNKLL 120
  121 ILLDTWNEAF SGVACKHPHY NWAYQELKRC GVKFPQRSKE APLMLEPPPP VTQSSSSSSM 180
  181 NLMSIGSFRR LDETMATEIE SLSLSSLESM RNVMDLVNDM VQAVNPSDKS ALKDELIVDL 240
  241 VEQCRSNQKK LIQMLTTTAD EDVLARGLEL NDSLQVVLAR HDAIASGVSL PLLLQAPEPR 300
  301 ETSSSLKTCG AAALESADSE SSSSSSSSES ETDEVEDVKD DFIQLAKRHA LLNALHSDEE 360
  361 EETLLLGNDN EKTAEAEAKT QCKDLALFDT TTTTTTKSEQ DIIELLSLTL STTALPSPQT 420
  421 QPQTQHPSFF ADDNILMNSY VVPWAQSQEE PQVPKMTQFA PSGPQFQPWP LQQQQPYSYG 480
  481 YPQPQWSGGQ VNSNDTTFWS QGGNENMVFE RNLQVSNSFP ARATGTSGAA TAATVDRQP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle