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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7487825, gi|7...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGISARIFAG HLGSTQLAAA SIGNSSFSLV YALMLGMGSA VETLCGQAYG AHRYEMLGIY  60
   61 LQRATIVLAL VGFPMTILYT FSYPILLLLG EPKTVSYMGS LYIAGLIPQI FAYAVYFTAQ 120
  121 KFLQAQSVVA PSAYISAAAL VLQISLTWIT VYAMGQGLMA QTFYVITSVR FKDTWTGFSW 180
  181 KSLHGLWSFF KLSAGSAVMI CLELWYTQIL VLLAGLLKDP ALSLDSLSIC MSISALSFMV 240
  241 SVGFNAAVSV RTSNELGAGN PKSALFSTWT ATFVSFVISV VEALVVIASR DNVSYIFTSD 300
  301 ADVAKAVSDL CPFLAVTIIL NGIQPVLSGV AVGCGWQTYV AYVNIGCYYI VGIPIGCILG 360
  361 FTFNFQAKGI WTGMIGGTLM QTLILLYVTY QADWDKEQNE LSNEIEKTFI AFFIALRRPA 420
  421 LSLSNSLTHP SQVSFFYHYC FRIPSGVRVS SSTFANAKLV TLRNHTVNLH IYYCSMAGTD 480
  481 NRRSRHDDES PKNPNKKKKG NRNPEKSLLI NLHSCSKRKD LSAALALYDA AITSSDIRLN 540
  541 QQHFQSLLYL CSAFISDPSL QTVAIDRGFQ IFDRMVSSGI SPNESSVTAV ARLAAAKGDG 600
  601 DYAFKLVKDL VAVGGVSVPR LRTYAPALLC FCDTLEAEKG YEVEDHMDAS GIVLEEAEIS 660
  661 ALLKKLRECV GCVSEETSKA IEEWFYGVKA SEVSDNGIGS DIELLRAAVL KNGGGWHGLG 720
  721 WVGEGKWIVK KGNVSSAGKC LSCDEHLACV DTNEVETEDF VNSLVTLAME RKAKMNSCEP 780
  781 MADFSEFQEW LEKHGDYEAI LDGANIGLYQ QNFADGGFSL PQILSQFSTK RLTYDISKRF 840
  841 FLFGWKRLNQ QNQDIMNSPP PSSNDGLAKR KRGRPRKDEN STPKPDMNLV GKVVTGVIEG 900
  901 SFDAGYLLNV KVKDSDTQLR GLVFIRGRVT PITPENDVAP LVKMYGREDI KNNQTDHSFP 960
  961 TDQPMQDAAV TTTDMDISES SRALVVVPQA TNGQAKEATK DEDGVIEGQA DTRLVEFFPT1020
 1021 PGTMMMTAQP NLVLVPKETE QQKTTGGSHG FDLMEEEPVR QGEKLPEELL HLELGNKTTL1080
 1081 SVDNNISTTE APDL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle