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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|224589398, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVGSLLFMF LLIWNFNGEL NALNDEGFAL LTLKQSISKD PDGSLSNWNS ENQNPCSWNG  60
   61 VTCDDNKVVV SLSIPKKKLL GYLPSSLGLL SNLRHLNLRS NELSGNLPVE LFKAQGLQSL 120
  121 VLYGNFLSGS IPNEIGDLKF LQILDLSRNS LNGSIPESVL KCNRLRSFDL SQNNLTGSVP 180
  181 SGFGQSLASL QKLDLSSNNL IGLVPDDLGN LTRLQGTLDL SHNSFSGSIP ASLGNLPEKV 240
  241 YVNLAYNNLS GPIPQTGALV NRGPTAFLGN PRLCGPPLKD PCLPDTDSSS TSHPFVPDNN 300
  301 EQGGGGSKKG EGLSKTAIVA IVVCDFIGIC IVGFLFSCCY LKICARRNSV DEEGYVLEKE 360
  361 GKEKKGSFCF RRDGSESPSS ENLEPQQDLV LLDKHIALDL DELLKASAFV LGKGGNGIVY 420
  421 KVVLEDGLTV AVRRLGEGGS QRCKEFQTEV EAIGKLRHPN IVSLKAYYWS VEEKLLIYDY 480
  481 IPNGSLTNAL HGNPGMVSFK PLSWGVRLKI MRGISRGLVY LHEFSPKKYV HGSLKLSNIL 540
  541 LGQDMEPHIS DFGLMHLSSI AGTLESTTVD RPSNKTASSI GSSANLSSFY LAPEATKATV 600
  601 KPSQKWDVYS FGVILLEMIT GRLPIVFVGK SEMEIVKWIQ MCIDEKKEMS DILDPYLVPN 660
  661 DTEIEEEVIA VLKIAMACVS TSPEKRPPMK HIADALTQIC LQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle