YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FK171_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRCFAWTPL VGAPLITTVH FTSPPSLRIF ASRSSAPSSS SSSSSTVAAA SRRSISLSII  60
   61 AVTSSVVSSF CFSSPALADF SEIPNSGGVK ALDLRIGDGD VPIEGDQIEI HYYGRLAAKQ 120
  121 GWRFDSTYDH KDSNGEAVPF TFVLGSSKVI PGIETAVRSM KVGGIRRVVI PPSQGYQNTS 180
  181 QEPLPPNFFD RQRLFTTIFN PTRLANGEGS TLGTLVFDIE LVSTRRLHR

Type	Start	End	Confidence
Signal Peptide	1	31	0.52
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	229	0.82