YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7486656, gi\|3...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSLSVSNKR YTYIHESGSK STREAIDIHH VIINGSSGTG YARRWGLGFF LVFLASSMYF  60
   61 LLGKLKGIIH MKQDNPARTL SWGCLLSGFL VMLHSRKFVK KESVIILPTF GIQLETQYLS 120
  121 GKTVSRFIPI DKILKPVLVE CVTPITCYWS LSLFLRGEEQ LTLVFKELRP PLKMLVPIWK 180
  181 ALCAAIGTDH QSETIAEEEH DVSS

Type	Start	End	Confidence
Cytoplasmic	1	44	0.68
Transmembrane Helix	45	63	0.94
Non-Cytoplasmic	64	76	0.58
Transmembrane Helix	77	95	0.79
Cytoplasmic	96	204	0.72