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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PAD4_ARATH
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDCRFETSE LQASVMISTP LFTDSWSSCN TANCNGSIKI HDIAGITYVA IPAVSMIQLG  60
   61 NLVGLPVTGD VLFPGLSSDE PLPMVDAAIL KLFLQLKIKE GLELELLGKK LVVITGHSTG 120
  121 GALAAFTALW LLSQSSPPSF RVFCITFGSP LLGNQSLSTS ISRSRLAHNF CHVVSIHDLV 180
  181 PRSSNEQFWP FGTYLFCSDK GGVCLDNAGS VRLMFNILNT TATQNTEEHQ RYGHYVFTLS 240
  241 HMFLKSRSFL GGSIPDNSYQ AGVALAVEAL GFSNDDTSGV LVKECIETAT RIVRAPILRS 300
  301 AELANELASV LPARLEIQWY KDRCDASEEQ LGYYDFFKRY SLKRDFKVNM SRIRLAKFWD 360
  361 TVIKMVETNE LPFDFHLGKK WIYASQFYQL LAEPLDIANF YKNRDIKTGG HYLEGNRPKR 420
  421 YEVIDKWQKG VKVPEECVRS RYASTTQDTC FWAKLEQAKE WLDEARKESS DPQRRSLLRE 480
  481 KIVPFESYAN TLVTKKEVSL DVKAKNSSYS VWEANLKEFK CKMGYENEIE MVVDESDAME 540
  541 T

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle