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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12321762, gi|...
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.65
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRPVLDIPV PGLLICSGYQ SRNDGPVLEF PNPGRFSLPV YSRNSLFSLV LSVLQKLWTG  60
   61 YWIHIPALNL SIEQSKSFPS SEQSSSSIAG VAVFFFFFFR LLIISPTGPW TDIVNMFSGI 120
  121 KIIPRDEVHD DSWEGEREKS KGGKDRRRKN KDVNRKERRG EGSKRDGKKI AKSGDGETVD 180
  181 DDLLEGDIVR KKMGLDWMLP PTRKADPNPA SDVEDKFEES APEVTKVNPR ELNPYLKENG 240
  241 TGYPEEESEK KHGKDQLLPS SVVGDGGASW RMKALKRAKE QAAREGLRLE EVAGERYGSL 300
  301 GNLVESVASQ RAAPSRAHLN AINNRRRGEN EKNDSEKKPK ERISEKGNNR EYLKGESLNH 360
  361 RVLRAPKTDP SLSWGKRKSQ THRNEDSKLI SEAAAHMNKF SNDGNFMKEM LSKQKNVSVS 420
  421 PVETRGDHRS DVEQEALPSE TNKDDEGTLP SMENLSVNKL AAKALQLRMK GKHEEAQKIM 480
  481 EEAERLKAKQ AVGDDSSKDH HSIRTAVRYP VKDMSGRRKN EDDTDMHLAK SIMQNKQYKT 540
  541 SNQAADDEYE YGDAPSKKSR KRESSSNIPE KDNRVKRIMT QQERCLFCFE NPKRPKHLVV 600
  601 SIANFTYLML PQHQPLVQGH CCILPMQHEA ASRSVDDNVW DEIRNFKKCL IMMYAKEGKD 660
  661 AVFLETVIGL SQQRRHCLIE CIPIPQEIAK EGPLYFKKAI DEAESEWSQH NAKKLIDTSV 720
  721 KGLRNSIPKN FPYFHVEFGL DKGFVHVIDD EQQFNSNLGL NVIRGMLELP EEDMYRRRRQ 780
  781 ESVESQKKAV ATFAREWEHF DWTKQLD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle