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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AATP9_ARATH
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMMGQLWTN TGSALATLMF VYTIFKQFFP LFGPQLEPFL YRLFGRFYPY IQITFHEYSG  60
   61 EHFKRSEAYL GIQSYLSKDS SARAKKLKAN TTKGSKSIVL SMDDKEEITD DFEGIRVWWQ 120
  121 SKKEGATRQS FSFYPEANEK RYYMLRFHRR DREVIIERYL EHVMREGKTI EQKNRERKLY 180
  181 SNTPGQSHGN NSKWSHVTFE HPATFDTLAM EENKKEEIKS DLIKFSKSKD YYKKIGKAWK 240
  241 RGYLLFGPPG TGKSTMIAAM ANFLEYDVYD LELTTVKDNT HLRRLLIETS AKSIIVIEDI 300
  301 DCSLNLTGQR KKKEEEEEDG DDKNTIEKKM MMKNEGENKE SKVTLSGLLN FIDGLWSACG 360
  361 GERIIVFTTN FVDKLDPALI RKGRMDKHIE MSYCCFEAFK VLAKNYLDVE ESEMFEEIKR 420
  421 LLEVEEIKMT PADVGENLLP KSEKEGGETC LKRLIEALKE EKEEAKKKVE EEEEEKQRKK 480
  481 EKVKEIEAEK EKKKKIEEEN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle