YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: STT7_ARATH
Protein type: Transmembrane
Type Confidence: 0.82
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATISPGGAY IGTPSPFLGK KLKPFSLTSP ILSFKPTVKL NSSCRAQLID TVHNLFIGVG  60
   61 VGLPCTVMEC GDMIYRSTLP KSNGLTITAP GVALALTALS YLWATPGVAP GFFDMFVLAF 120
  121 VERLFRPTFR KDDFVVGKKL GEGSFGVVYK VSLSKKRSNE EGEYVLKKAT EYGAVEIWMN 180
  181 ERVRRACGNS CADFVYGFLD KSSKKGPEYW LLWKYEGEST LAGLMQSKEF PYNVETIILG 240
  241 KVQDLPKGLE RENKIIQTIM RQLLFALDGL HSTGIIHRDV KPQNIIFSEG SRSFKIIDLG 300
  301 AAADLRVGIN YIPKEFLLDP RYAAPEQYIM STQTPSAPSA PVAAALSPVL WQMNLPDRFD 360
  361 IYSIGLIFLQ MAFPSLRSDS NLIQFNRQLK RCDYDLTAWR KLVEPRASAD LRRGFELVDL 420
  421 DGGIGWELLT SMVRYKARQR ISAKAALAHP YFDRQGLLAL SVMQNLRMQY FRATQQDYSE 480
  481 AANWVIQLMA KNGTEKDGGF TETQLQELRE KEPRKKANAQ RNALASALRL QRKLVKTVTE 540
  541 TIDEISDGRK TVWWNRWIPR EE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle