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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GAUTA_ARATH
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRRGGDSFR RAGRRKISNV VWWVLSGIAL LLFFLILSKA GHIEPRPSIP KRRYRNDKFV  60
   61 EGMNMTEEML SPTSVARQVN DQIALAKAFV VIAKESKNLQ FAWDLSAQIR NSQLLLSSAA 120
  121 TRRSPLTVLE SESTIRDMAV LLYQAQQLHY DSATMIMRLK ASIQALEEQM SSVSEKSSKY 180
  181 GQIAAEEVPK SLYCLGVRLT TEWFQNLDLQ RTLKERSRVD SKLTDNSLYH FCVFSDNIIA 240
  241 TSVVVNSTAL NSKAPEKVVF HLVTNEINYA AMKAWFAINM DNLRGVTVEV QKFEDFSWLN 300
  301 ASYVPVLKQL QDSDTQSYYF SGHNDDGRTP IKFRNPKYLS MLNHLRFYIP EVFPALKKVV 360
  361 FLDDDVVVQK DLSSLFSIDL NKNVNGAVET CMETFHRYHK YLNYSHPLIR SHFDPDACGW 420
  421 AFGMNVFDLV EWRKRNVTGI YHYWQEKNVD RTLWKLGTLP PGLLTFYGLT EALEASWHIL 480
  481 GLGYTNVDAR VIEKGAVLHF NGNLKPWLKI GIEKYKPLWE RYVDYTSPFM QQCNFH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle