YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATL37_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIFTRDFSH RILACVLLPL FLFQCLPYVT CQQGSESAGR NGKSKESSII GIVLLSLFLL  60
   61 LLVVYCLNYG CCIEENETGG HEVLHSRVRR GIDKDVIESF PAFLYSEVKA FKIGNGGVEC 120
  121 AICLCEFEDE EPLRWMPPCS HTFHANCIDE WLSSRSTCPV CRANLSLKSG DSFPHPSMDV 180
  181 ETGNAQRGVQ ESPDERSLTG SSVTCNNNAN YTTPRSRSTG LLSSWHVPEL FLPRSHSTGH 240
  241 SLVQPCQNID RFTLQLPEEV QRQLVSLNLI KRSHIALPRA RSSRQGYRSG SVGNERTGFS 300
  301 QGRQTLRRAI STSLSFSFQP APVRSTLDRD NLMRETSQAN DKDFGERSFQ RLMPEKN

Type	Start	End	Confidence
Signal Peptide	1	31	0.83
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	357	0.92