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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|25373138, gi|...
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASPAKFFF GFLIVSIVLW MIFMLFAWML SRVLGASVVF RVGGWKCLKD VVVKFKKGAI  60
   61 ESVSASEIKL SLRQSLVKLG VGFLSRDPKV QVLISDLEVV MRSSTSTTNL QKAKSHKPRT 120
  121 SGRGKWMVVA NVARFLSVSV ADMVVKTTKV IVEVKELKLD INKDGGTKPN LYVKLNVLPI 180
  181 LVHLCESRII SDQSSNVSFE CCPASQASSA SPDRSAATLF CDELSLSSEF GHDRAVGIVV 240
  241 RNVEVTSGDV ILNFDEDSFP KSKQSSASLR SDEVRTSATA ASSAKKPHKE HQLVAALAKY 300
  301 SSSFPEKVSF SLPKLDVRCV NREHDLLAEN NITGIQLRSV KSKSFEDTGE STRLDVQMEL 360
  361 SEIHVFREAD SSILEIMKVD VVSFIYIPVQ PVLPIRAEVD IKLGGTRCNL FISRLQPWLR 420
  421 LHFLKKKKLV LQEKTHNLEK TKAADMKAIM WTGTVSAPEM TVMLYGTEDI PLYHSSHVFA 480
  481 NNVSSLGTAV HVELGELNLH LADEYQECFR EHLFGIEPNS GSLMHIAKVS LDWGRRDRTS 540
  541 SDEVGFRSKL VLSVDVTGMG IYFSFKRVQS LIINALSFKA LFKTLSVTGK KMNKTVSVQP 600
  601 SKGSGKGTRL VNINLERCCV NFCDDTGLDN TVIDDPKSVN YGSQGGRVSF SSLADGTPRT 660
  661 ASILSTAPEA CKRLKYSVSL EISQFSFCLN KDKLSTQMEL GRAKSIYQEY LEEHTPCSNV 720
  721 ILFDMHNAKL VRRSGGLNEI DVCSLFSATH ISLGWEPDVH LSFYELFLRL RSLVYAQRHK 780
  781 EPESGCNKGI SSVKDGGPSE KINQSNSVNK QKKKESMFAI DVETLTISAE VGDGVEVKLE 840
  841 AQSIFSENAC IGVLLEGLML AFNGSRVFKT TRMQVSRIPT ATNLSDAVPV MTDGPWDWVV 900
  901 QGLDVHICMP YKLQLRAIDD SIEEMLRGLK LISVAKGKHI LSGKRESSKP KKSSPKFGRI 960
  961 KFCIRRLTAD IEEEPIQGWL DEHYQLVKKE ACELAVRLKF LEDLIHKAGQ SPKGAETSAV1020
 1021 LDERKMFFDG VEIDVEDPVA INKVKEEIHK RSFQSYYQAC QGLAPSEGSG ACREGFQAGF1080
 1081 KPSAARTSLL SVCATDFDLS LTAVHGGDAG LIEVLKKLDP ICEENDIPFS RLYGSNVYLN1140
 1141 TGSLVVQLRN YTLPLLSGTS GKCEGRIVLA QQATCFQPQI SQDVFVGRWR KVKMFRSASG1200
 1201 TTPPLKTYSD LRIHFEQGEV SFGVGYEPAF ADISYAFTVA LRRANLSHRN PDMVQVIKKE1260
 1261 RSLPWWDDMR NYVHGNITLS FSESKWSVLA TTDPYESLDQ LQIVSGPIEL KQSDGRVFVS1320
 1321 AKDFKIKLSS LESLISRHSL KVPVRASGAA FIEAPDFNLE VTMDWDCESG NSLNHYLYAF1380
 1381 PAEGKPREKV FDPFRSTSLS LRWNFSLRPE KFHQSPSSTE HPTDVGTVYS SQDKPDSIPL1440
 1441 ASPTMNLGAH DLAWILKFWG LNYYPPHKLR SFSRWPRFGV PRAARSGNLS LDKVMTEFML1500
 1501 RVDATPSLIK YMPWDSDDPA KGLTFNMAKL KYELCYSRGK QKYTFECKRD ALDLVYQGLD1560
 1561 LHVPKAFINK DEHPCIPGSV QVLRKSTQDA LIDRVPSGKD HKRYEKHRDE GFLLSSDYFT1620
 1621 IRRQAPKADP ERLLAWQEAG RRNLEMTYVR SEFENGSESD EHIRSDPSDD DGYNVVIADN1680
 1681 CQRVFVYGLK LLWTIENRDA VWSFVGGISK AFEPPKPSPS RQYTQRKIHE ENQKESCPET1740
 1741 HQGEMSRSSA SPGRNLPSSP SHSIKIEKSD DIGTVETIES EEEGTRHFMV NVIEPQFNLH1800
 1801 SEEANGRFLL AAVSGRVLAR SFHSIMRVGV EVIEQALGTG SVKIPECSPE MTWTRMEVSV1860
 1861 MLEHVQAHVA PTDVDPGAGL QWLPKIRRNS PKVKRTGALL ERVFMPCDMY FRYTRHKGGT1920
 1921 PDLKVKPLKE LTFNSHNIIA TMTSRQFQVM LDVLTNLLFA RLPKPRKSSL QCPTEDEDVE1980
 1981 EEADEVVPYG VEEVELAKIN LEEKERERKL LLDDIRKLSP CSDNMDDTHI EREGELWMIS2040
 2041 TRRSILVQGL KKELTYAQKS RKAASASLRM ALQKAAQLRI MEKEKNKSPS YAMCISLQIN2100
 2101 KVVWSMLVDG KSFAEAEIND MIYDFDRDYK DIGVARFTTK YFVVRNCLPN AKSDMLLSAW2160
 2161 NPPPEWGKKV MLRVDAKQGA PKDAHYPLEL FHVEIYPLRI HLTETMYRMM WEYFFPEEEQ2220
 2221 DSQSRQEVWK ISTTAGSKRV KKGLVGHESS GHAIKDVEAS RMSSSALSAS AAVQSQSNDD2280
 2281 SVQKSNVICL RSSTGASAQE LRRTSSFDRE ENVAEPIANE LVLQAHSCNV SSSIEQQEDF2340
 2341 SKQKVKEIKP VKSGRSSHEE KKAGKSHEEK KSRPRKMMEF HNIKISQVEL LVTYEGSRFV2400
 2401 VNDLKLLMDT FHRVEFTGTW RRLFSRVKKH IIWGVLKSVT GMQGKKFKDK SHNNRESTDN2460
 2461 DLNLSDNDQT GKPDQQQVTW FKRQSDGAGD GFVTSIRGLF NTQRRKAKAF VLRTMRGEAE2520
 2521 NDFHGDWSDS DVEFSPFARQ LTITKAKRLI RRHTKKFRPR SQRGSTSQQR ESLPSSPIET2580
 2581 TPFESGYSSG SSPYEDFRE

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