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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|6911887, gi|1...
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.33
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRKCRIWLP KQLASTDDLS HSLLFGWFVC HSSSCLDVVV SFISDESSLS NAGSKLQDVL  60
   61 RETNEKMPST LRDKAAFTLL GRYDISRNAN GNVSKIIRDK DMSRKAGAYV RPCKYSGLSC 120
  121 GCHKSIELWN SIQVLDCIIY TGMGILYLNA MSTYVIVYDT PVFGSHHFSL SFSNSSPQTK 180
  181 APLKKPKWVD DLHNRKPLNE METVILSLNC AAAAKIAYKK ISTQLETSSQ NFSISYLISS 240
  241 LTWRLLATIL GSLSSLYYSL AQFFYLLSSF LIFSWVHIAS RRVLKNTWIN FRIRSCQILY 300
  301 WPIFLEEIDM MSISCVKHAE EAALQRHSTW SAMAVDLVLG NLIGLGLLFN TESVCSFVFD 360
  361 FAKEFTNGIL RSGSVWLMGV PAGFKLNTEL AGVLGMVSLN VIQIWSTLWV FMASFIFCLI 420
  421 RVIAILGITF GATVSAAFVI DVITFATLHI MALHWAITLV YSHQIQALAA LWRLFRGRKL 480
  481 NPLRQRMDSY GYTVKQHVVG SLLFTPLLLL LPTTSVFYIF FTITSTTINS ICMLIEFAIS 540
  541 VIHATPYAEV MIWLVRRKRF PCGVWFEMEH CGEHILKSND AFEDSKSLLE EHGTPEKNSL 600
  601 MVSNLRSNFL TLGQILLPHY KTIFSGISAS SLTTSARGVL SGKRMPSKLG LDLPPPRPWL 660
  661 HMPLRQYWML CHNSISSCGK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle