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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MNS4_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSNFKWLLF AILISLTFSG FVLHHGVLAE SVKPDEAKQL RDEVRGMFYH AFDGYMNNAF  60
   61 PLDELRPLSC QGEDTLGGYA LTLIDSLDTL ALLGDRERFT SSVEWIGKNL QFNINKTVSV 120
  121 FETTIRVLGG LLSAHLIASD YATGMRIPSY NNELLVLAEN LARRMLPAFD TPTGIPFGSV 180
  181 NLMYGVDKHE SKITSTAGGG TLSLEFGVLS RLTNDPVFEQ VAKNAVRGLW ARRSNLDLVG 240
  241 AHINVFTGEW TQKDAGIGTS IDSFYEYLLK AYILFGDEEY LYIFQEAYRS AMQYLHKDPW 300
  301 YVEVNMDSAA IVWPVFNSLQ AFWPGLQVLA GDVDPAIRTH TAFFSVWKRY GFTPEGFNLA 360
  361 TLSVQYGQKS YPLRPELIES TYWLYKATRD PRYLDAGRDF VASLQYGAKC PCGYCHITDV 420
  421 ELHKQEDHME SFFLAETVKY LWLLFDLAVD SDNLVDNGPY KYIFSTEGHL LPITPQISLA 480
  481 REHCSYFGGY CPSNSTKLEQ EVLGEDSSND DHSNDYPYHE SFPVTGLIKG LCPGLTHAQK 540
  541 YGFSYVLPEK TDREDVNQPK PVVTSSSIVL ISDQTVEKRP QEEEGFTSQS EPIMTISGGS 600
  601 SNDQTGQELT LLESETDDQR SYSS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle