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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ACR4L_ARATH
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRMFETRARE WILLVKLVLF TSIWQLASAL GSMSSIAISY GEGGSVFCGL KSDGSHLVVC  60
   61 YGSNSAILYG TPGHLQFIGL TGGDGFMCGL LMLSHQPYCW GNSAFIQMGV PQPMTKGAEY 120
  121 LEVSAGDYHL CGLRKPIVGR RKNSNIISSS LVDCWGYNMT RNFVFDKQLH SLSAGSEFNC 180
  181 ALSSKDKSVF CWGDENSSQV ISLIPKEKKF QKIAAGGYHV CGILDGLESR VLCWGKSLEF 240
  241 EEEVTGTSTE EKILDLPPKE PLLAVVGGKF YACGIKRYDH SAVCWGFFVN RSTPAPTGIG 300
  301 FYDLAAGNYF TCGVLTGTSM SPVCWGLGFP ASIPLAVSPG LCIDTPCPPG THELSNQENS 360
  361 PCKFTGSHIC LPCSTSCPPG MYQKSVCTER SDQVCVYNCS SCSSHDCSSN CSSSATSGGK 420
  421 EKGKFWSLQL PIATAEIGFA LFLVAVVSIT AALYIRYRLR NCRCSENDTR SSKDSAFTKD 480
  481 NGKIRPDLDE LQKRRRARVF TYEELEKAAD GFKEESIVGK GSFSCVYKGV LRDGTTVAVK 540
  541 RAIMSSDKQK NSNEFRTELD LLSRLNHAHL LSLLGYCEEC GERLLVYEFM AHGSLHNHLH 600
  601 GKNKALKEQL DWVKRVTIAV QAARGIEYLH GYACPPVIHR DIKSSNILID EEHNARVADF 660
  661 GLSLLGPVDS GSPLAELPAG TLGYLDPEYY RLHYLTTKSD VYSFGVLLLE ILSGRKAIDM 720
  721 HYEEGNIVEW AVPLIKAGDI NALLDPVLKH PSEIEALKRI VSVACKCVRM RGKDRPSMDK 780
  781 VTTALERALA QLMGNPSSEQ PILPTEVVLG SSRMHKKSWR IGSKRSGSEN TEFRGGSWIT 840
  841 FPSVTSSQRR KSSASEGDVA EEEDEGRKQQ EALRSLEEEI GPASPGQSLF LHHNF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle