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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|7267484, gi|1...
Protein type: Transmembrane
Type Confidence: 0.77
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHEMWCLIDR RPIRFSLYEF ENITGLNCDM FDESDTGETD YKDFWNEMGV AMSVGPLFTE  60
   61 LERVFEISKT WSLEKRMMVG RLCLQYVGVH GIHHGSRVPL SSAKRVLDPV AFEKYPWGRV 120
  121 AFDSLLRSVK FVKYDGDSYV IHGCVQALLV WIYESVPGIG EACGFRKTTL TGVPLLDWRS 180
  181 SKKRFNFTAF IEKEKAAHGQ VSRHKRKQNQ ESSNEDGESK VMESTPADDV SHKKQRTGKA 240
  241 HIKVDEEEKT SLLDIRNMLE KMNVTISDMD KNASSRLDGL EKKVTCLEAS VKTRFEAVET 300
  301 DMRVLKESQP LVVCNEAATS NNNDEYEANS NQCSWVVEEK SGSVDGLPIQ RVVKKAVNSV 360
  361 KNMEAATKVL TKKKVAKSDK KKTIVNVEKV EKPKPEMKKT AVKVEKVDSP KPEKKKSVVA 420
  421 PTTKTFDDDV VDVTDKVNAD NLKMASRSEE TFSNPLDQMA NKATTDALRA LQEGLDNLDG 480
  481 ITSKRRRVPQ LAGSQKYPSV GNSTVKRIIT DVPSSSSVTE HLQPVSDDQF DRLKDWLEPD 540
  541 FEKEGLNTSN FNARFYWQIM TPRSDWSTEK YGWLKDYHMG AAMSLFRRRF NRDPSKYPNQ 600
  601 RIAFLDQDLI STMLKDYKQF QPDYRCFKFR EHYEDQVNGT AQCDAAKNKK WFVDVDHLYA 660
  661 YLFVNGNHWV ALDIDLPKKR INVYDSIPSL TTDTEMVIQC MFVMTMIPAM LSSFIPSKQR 720
  721 RRSYSKLEWK RITKIPENLD ACDCAIYSIK YIECLALGKS FDGLCDENMQ SLWTKLAVEM 780
  781 FEELGKNAGT LHSEVRCKAF KFPSLMDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle