YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|8809586
Protein type:	Transmembrane
Type Confidence:	0.73
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMLFRPPPS QCRSFSPFVF NYSSREVSSS SRLSLKTSGD EENWVSRFRS KSLSLVFSGA  60
   61 LALGLSLSGV GFADAKVGVN KPELLPKEFT SVIDVADFLS NGQEKRIAQE IANLEKDTGF 120
  121 KLRVLAQNYP VTPGLAIKDF WQVDDSTIVF VADPTFAAVM AISSCLREPV GRNNCAEIQ

Type	Start	End	Confidence
Cytoplasmic	1	52	0.68
Transmembrane Helix	53	73	0.69
Non-Cytoplasmic	74	179	0.88