YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FKB19_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASISSFGCF PQSTALAGTS STTRCRTTVA ARLADQSDDF APLRSSGGNC GCVNNSGEFD  60
   61 RRKLLVSSVG LLIGALSYDS KDGDFASASQ FADMPALKGK DYGKTKMKYP DYTETQSGLQ 120
  121 YKDLRVGTGP IAKKGDKVVV DWDGYTIGYY GRIFEARNKT KGGSFEGDDK EFFKFTLGSN 180
  181 EVIPAFEEAV SGMALGGIRR IIVPPELGYP DNDYNKSGPR PMTFSGQRAL DFVLRNQGLI 240
  241 DKTLLFDVEL LKIVPN

Type	Start	End	Confidence
Signal Peptide	1	17	0.88
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	256	0.99