YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TATB_ARATH
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMALQIIAS SSSSPTITKS HLFSYPPLQS RYKASKPNLS SWFSLLGSSR FSPYIGLKHL  60
   61 GISISPKSSN PEKKRRCKSM MIRASLFGVG APEALVIGVV ALLVFGPKGL AEVARNLGKT 120
  121 LRTFQPTIRE LQDVSRDFKS TLEREIGLDD ISTPNVYNQN RTNPVQPPPP PPPPSVPSTE 180
  181 APVTANDPND SQSPKAYTSE DYLKFTEEQL KALSPAESQT EDQTQTQEPP QPTTVQTPTG 240
  241 ESQPNGTARE TTAASPPRQD

Type	Start	End	Confidence
Cytoplasmic	1	83	0.82
Transmembrane Helix	84	105	0.84
Non-Cytoplasmic	106	260	0.95