YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NIFU4_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGIARLVTS LSRIGGRKVV SGTSTVTSSS SSSLLLSRRS LFISATNLLN SRTKDSALPS  60
   61 LNSSLLAQKW NFLGGQRRTM FIQTQSTPNP SSLMFYPGKP VMEVGSADFP NVRSALGSPL 120
  121 AKSIYSIDGV VRVFFGSDFV TVTKSDDVSW DILKPEIFAA VMDFYSSGQP LFLDSQAAAA 180
  181 KDTAISEDDS ETVAMIKELL ETRIRPAVQD DGGDIEYCGF DPESGIVKLR MQGACSGCPS 240
  241 SSVTLKSGIE NMLMHYVSEV KGVEQEFDGE DEEGTLSGEM RVE

Type	Start	End	Confidence
Signal Peptide	1	33	0.67
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	283	0.99