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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AGT22_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRFAAKRSV QNISVSLWRR CISSTSQAAT ASVKDSDEFQ ARLPPFAYTP PPYTGPSADV  60
   61 ILSKRKEFLS PSMFCLYRKP LNIVDGKMQY LFDESGRRYL DAFAGIAVVN CGHCHPDVVE 120
  121 PVINQIKRLQ HPTVLYLNHA IADFSEALAS KLPGDLKVVF FTNSGTEANE LALMMAKLYT 180
  181 GCQDIVAVRN GYHGNAAATM GATGQSMWKF NVVQNSVHHA LNPDPYRGVF GSDGEKYAKD 240
  241 LQDLIQYGTT GHIAGFICEA IQGVGGIVEL APGYLSAAYD TVKKAGGLFI ADEVQSGFAR 300
  301 TGNFWGFEAH NVVPDIVTMA KGIGNGFPLG AVVTTPEIAG VLTRRSYFNT FGGNSVSTTA 360
  361 GLAVLNVIEK EKLQENAAMV GSYLKEKLTQ LKEKHEIIGD VRGRGLMLGV ELVSDRKLKT 420
  421 PATAETLHIM DQMKELGVLI GKGGYFGNVF RITPPLCFTK DDADFLVEAM DYSMSKM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle