YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25370784, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNSTEELSS DSTNNGTVEI TYKTIGPARP SQIRVASHIK IRDLRNAIAE KGKFPVSTLR  60
   61 MILRGKALQD EEDGDDLYVT LKDQDSFIVA VIPNPPAGVE SFDDDDDDDL KFKLPPSASR 120
  121 WKRKLYYFLR NKLKLPDIIL MGLFSLSLKM WVIITLWFIL APIAHRWDLG PIFILGTGFS 180
  181 IILLNLGKRQ PGDVSAYSIF NEDFRELPGT YNADRIDRDI RAGQM

Type	Start	End	Confidence
Cytoplasmic	1	137	0.98
Transmembrane Helix	138	161	0.90
Non-Cytoplasmic	162	168	0.76
Transmembrane Helix	169	187	0.94
Cytoplasmic	188	225	0.97