YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RBOHA_ARATH
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNRSEMQKL GFEHVRYYTE SPYNRGESSA NVATTSNYYG EDEPYVEITL DIHDDSVSVY  60
   61 GLKSPNHRGA GSNYEDQSLL RQGRSGRSNS VLKRLASSVS TGITRVASSV SSSSARKPPR 120
  121 PQLAKLRRSK SRAELALKGL KFITKTDGVT GWPEVEKRFY VMTMTTNGLL HRSRFGECIG 180
  181 MKSTEFALAL FDALARRENV SGDSININEL KEFWKQITDQ DFDSRLRTFF AMVDKDSDGR 240
  241 LNEAEVREII TLSASANELD NIRRQADEYA ALIMEELDPY HYGYIMIENL EILLLQAPMQ 300
  301 DVRDGEGKKL SKMLSQNLMV PQSRNLGARF CRGMKYFLFD NWKRVWVMAL WIGAMAGLFT 360
  361 WKFMEYRKRS AYEVMGVCVC IAKGAAETLK LNMAMILLPV CRNTITWLRT KTKLSAIVPF 420
  421 DDSLNFHKVI AIGISVGVGI HATSHLACDF PRLIAADEDQ YEPMEKYFGP QTKRYLDFVQ 480
  481 SVEGVTGIGM VVLMTIAFTL ATTWFRRNKL NLPGPLKKIT GFNAFWYSHH LFVIVYSLLV 540
  541 VHGFYVYLII EPWYKKTTWM YLMVPVVLYL CERLIRAFRS SVEAVSVLKV AVLPGNVLSL 600
  601 HLSRPSNFRY KSGQYMYLNC SAVSTLEWHP FSITSAPGDD YLSVHIRVLG DWTKQLRSLF 660
  661 SEVCKPRPPD EHRLNRADSK HWDYIPDFPR ILIDGPYGAP AQDYKKFEVV LLVGLGIGAT 720
  721 PMISIVSDII NNLKGVEEGS NRRQSPIHNM VTPPVSPSRK SETFRTKRAY FYWVTREQGS 780
  781 FDWFKNVMDE VTETDRKNVI ELHNYCTSVY EEGDARSALI TMLQSLNHAK HGVDVVSGTR 840
  841 VMSHFARPNW RSVFKRIAVN HPKTRVGVFY CGAAGLVKEL RHLSLDFSHK TSTKFIFHKE 900
  901 NF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle