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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SBT35_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.68
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRNCRVLLVL VLSLVIVLNV VRASDESKVH IVYLGEKQHD DPEFVSESHH QMLSSLLGSK  60
   61 VDAHESMVYS YRHGFSGFAA KLTESQAKKL ADSPEVVHVM ADSFYELATT RTWDYLGLSV 120
  121 ANPNNLLNDT NMGDQVIIGF IDTGVWPESE SFNDNGVGPI PSHWKGGCES GEKFISTNCN 180
  181 RKLIGAKYFI NGFLAENEGF NTTESRDYIS ARDFIGHGTH TASIAGGSFV PNISYKGLAG 240
  241 GNLRGGAPRA RIAIYKACWY VDQLGAVACS SSDILKAMDE SMHDGVDVLS LSLGAQIPLY 300
  301 PETDLRDRIA TGAFHAVAKG IIVVCAGGNS GPAAQTVLNT APWIITVAAT TLDRSFPTPI 360
  361 TLGNRKVILG QALYTGQELG FTSLVYPENA GFTNETFSGV CERLNLNPNR TMAGKVVLCF 420
  421 TTNTLFTAVS RAASYVKAAG GLGVIIARNP GYNLTPCRDD FPCVAIDYEL GTDVLLYIRS 480
  481 TRSPVVKIQP SRTLVGQPVG TKVATFSSRG PNSISPAILK PDIGAPGVSI LAATSPDSNS 540
  541 SVGGFDILAG TSMAAPVVAG VVALLKALHP NWSPAAFRSA IVTTAWRTDP FGEQIFAEGS 600
  601 SRKVADPFDY GGGIVNPEKA ADPGLIYDMG PRDYILYLCS AGYNDSSITQ LVGNVTVCST 660
  661 PKTSVLDVNL PSITIPDLKD EVTLTRTVTN VGTVDSVYKV VVEPPLGIQV VVAPETLVFN 720
  721 SKTKNVSFTV RVSTTHKINT GFYFGNLIWT DSMHNVTIPV SVRTQILQNY YDEN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle