YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15229674, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAERFSSGEA QYWPNYGSTA TTTVSNSPIS SFFHQLRSHS PTSSQLFGFL ALFISTGILL  60
   61 FLLGVSVTAA VLGFIVFLPL IIISSPIWIP VFVVVGGFLT VSGFLVGTVA LVSWTYRYFR 120
  121 GMHPVGSNQM DYARSRIYDT ASHVKDYARE YGGYFHGRAK DAAPGA

Type	Start	End	Confidence
Cytoplasmic	1	45	0.70
Transmembrane Helix	46	78	0.82
Non-Cytoplasmic	79	87	0.57
Transmembrane Helix	88	114	0.85
Cytoplasmic	115	166	0.88