YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YLS9_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAEQPLNGA FYGPSVPPPA PKGYYRRGHG RGCGCCLLSL FVKVIISLIV ILGVAALIFW  60
   61 LIVRPRAIKF HVTDASLTRF DHTSPDNILR YNLALTVPVR NPNKRIGLYY DRIEAHAYYE 120
  121 GKRFSTITLT PFYQGHKNTT VLTPTFQGQN LVIFNAGQSR TLNAERISGV YNIEIKFRLR 180
  181 VRFKLGDLKF RRIKPKVDCD DLRLPLSTSN GTTTTSTVFP IKCDFDF

Type	Start	End	Confidence
Cytoplasmic	1	38	0.70
Transmembrane Helix	39	63	0.88
Non-Cytoplasmic	64	227	0.75