YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15221559, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENTLSPLLS PSPASEVAAR VSSLFVYPIK SCRGISLSQA ALTPTGFRWD RNWLIVNSKG  60
   61 RGLTQRVEPK LSLIEVEMPK HAFGEDWEPE KSSNMVVRAP GMDALKVSLA KPDKIADGVS 120
  121 VWEWSGSALD EGEEASQWFT NFVGKPCRLV RFNSAYETRP VDPNYAPGHI AMFSDMYPFL 180
  181 LISQGSLDSL NKLLKEPVPI NRFRPNIFVD GCEPFAEDLW TEILINGFTF HGVKLCSRCK 240
  241 VPTISQETGI GGQEPIETLR TFRSDKVLQP KSKPHGKIYF GQNMVWKDGF GDGIGKTIEI 300
  301 GDSVVVLRKL SSPAEAAT

Type	Start	End	Confidence
Signal Peptide	1	19	0.53
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	318	0.99