YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GDL28_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTNRKKMKV HIGGYVLILA LTVSVILQQP ELVTGQARVP AMFVLGDSLV DAGNNNFLQT  60
   61 VARANFLPYG IDMNYQPTGR FSNGLTFIDL LARLLEIPSP PPFADPTTSG NRILQGVNYA 120
  121 SAAAGILDVS GYNYGGRFSL NQQMVNLETT LSQLRTMMSP QNFTDYLARS LVVLVFGSND 180
  181 YINNYLMPNL YDSSIRFRPP DFANLLLSQY ARQLLTLYSL GLRKIFIPGV APLGCIPNQR 240
  241 ARGISPPDRC VDSVNQILGT FNQGLKSLVD QLNQRSPGAI YVYGNTYSAI GDILNNPAAY 300
  301 GFSVVDRACC GIGRNQGQIT CLPLQTPCPN RNQYVFWDAF HPTQTANSIL ARRAFYGPPS 360
  361 DAYPVNVQQM TLLH

Type	Start	End	Confidence
Signal Peptide	1	35	0.66
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	374	0.99