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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Y1457_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATCSSSLLV LPNLRLSSNQ RRNFKVRAQI SGENKKATSL EPVNNNGSVS LSTTVQNQKG  60
   61 ANEVNGKGKS KRKIVSDEIE LLWDDGYGSK SVKDYFAAAK EILKADGGPP RWFSPVDCGR 120
  121 PVEDAPTLLF LPGMDGTGMG LVPHHKALGK AFHVSCLHIP VLDRTPFEGL LKVVEDVLRQ 180
  181 EQATRPNKPI YLVGDSFGGC LALAVAARNR SLDLVLILVN PATSFDRSPL QPLLPILEMV 240
  241 PEELHFTVPY ALSFIMGDPI KMATLGIDNQ LPTGVKIEKL RQRLTKTMLP LLSELGGIIP 300
  301 RETLLWKLKL LRSGCAYANS RIHAVQAEVL VLASGKDMML PSQEEAKRLH GLLKNCSVRC 360
  361 FKDNGHTLLL EDSISLLTVI KGTGKYRRSW RYDLVSDFLP PSKGELAYAL DEVLGFLRNA 420
  421 VGSVFFSTME DGKIVKGLAG VPDKGPVLLV GYHMLMGLEL GPMSEAFIKE KNILFRGMAH 480
  481 PVLYSDNDPA KAFDYGDWIK VFGAYPVTAT NLFKLLDSKS HVLLFPGGAR EALHNRGEQY 540
  541 KLIWPEQQEF VRMAARFGAT IVPFGTVGED DIAELVLDYN DLMKIPILND YITEVTRDTK 600
  601 QFKLREESEG EVANQPLYLP GLIPKVPGRF YYLFGKPIET KGRPELVKDK EEANQVYLEV 660
  661 KAEVENSIAY LLKKREEDPY RSVLDRLNYS LTHTTATHVP SFEP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle