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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: C96AF_ARATH
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMLGFYVTF IFFLVCLFTY FFLQKKPQGQ PILKNWPFLR MLPGMLHQIP RIYDWTVEVL  60
   61 EATNLTFYFK GPWLSGTDML FTADPRNIHH ILSSNFGNYP KGPEFKKIFD VLGEGILTVD 120
  121 FELWEEMRKS NHALFHNQDF IELSVSSNKS KLKEGLVPFL DNAAQKNIII ELQDVFQRFM 180
  181 FDTSSILMTG YDPMSLSIEM LEVEFGEAAD IGEEAIYYRH FKPVILWRLQ NWIGIGLERK 240
  241 MRTALATVNR MFAKIISSRR KEEISRAKTE PYSKDALTYY MNVDTSKYKL LKPNKDKFIR 300
  301 DVIFSLVLAG RDTTSSVLTW FFWLLSKHPQ VMAKLRHEIN TKFDNEDLEK LVYLHAALSE 360
  361 SMRLYPPLPF NHKSPAKPDV LPSGHKVDAN SKIVICIYAL GRMRSVWGED ALDFKPERWI 420
  421 SDNGGLRHEP SYKFMAFNSG PRTCLGKNLA LLQMKMVALE IIRNYDFKVI EGHKVEPIPS 480
  481 ILLRMKHGLK VTVTKKI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle