YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|25373347, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFYGTAVWDP WLIVGQIICL QCSYYLTLGL FTMVFLGLRV PRLSLVYFFD YATLTTSTFT  60
   61 GWSVIASFLF SSLAGAVYMI FLVERARKCL DFSATLYIIH LFFCIMYGGW PSSMAWWVVN 120
  121 GTGLAVMALL AEYLCIKREQ REIPMDRFHS RV

Type	Start	End	Confidence
Cytoplasmic	1	16	0.77
Transmembrane Helix	17	38	0.83
Non-Cytoplasmic	39	58	0.85
Transmembrane Helix	59	82	0.91
Cytoplasmic	83	88	0.93
Transmembrane Helix	89	110	0.88
Non-Cytoplasmic	111	115	0.80
Transmembrane Helix	116	136	0.94
Cytoplasmic	137	152	0.97