YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CX5B2_ARATH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWRRIVSSHL KSISAVGSCA APSCRHAVVE STHLSLSTRA SSIPAYSSIF SRLIGSAAAD  60
   61 TAVKKRVEDV MPIATGHEKE ELQAELEGRK LDDIDFPEGP FGTKEAPAVV KSYYDMRIVG 120
  121 CPGGEGEDEH DVVWFWLEKG KSFECPVCTQ YFKLEVVGPG GPPDGHGDDH H

Type	Start	End	Confidence
Signal Peptide	1	27	0.96
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	171	0.99