YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28393132, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGESFRLFNH HHFLTTFLII IAMLKLVHTT TTTTTTTTTN TEFVKSSCTF TTYPRLCFSS  60
   61 LSTHASLIQT SPKLMAHAAL NITLASAKVT SAMMVRLSNS RLKPKEVSAM RDCVEELGDT 120
  121 LEELRKSIGE MCQLSGSNYE VYISDIQTWV SAALTDVNTC TDGFEGEDMD GKVKVLVRGR 180
  181 ILVIAHLTSN ALALINHFAS IHG

Type	Start	End	Confidence
Cytoplasmic	1	7	0.80
Transmembrane Helix	8	29	0.80
Non-Cytoplasmic	30	73	0.81
Transmembrane Helix	74	95	0.60
Cytoplasmic	96	180	0.79
Transmembrane Helix	181	201	0.62
Non-Cytoplasmic	202	203	0.82