YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FIS1B_ARATH
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAAIGKVFD SVSDFFSGAA SASADEFPLC DSDIISGCEK ELAEAQDEGR KKECIMRLSW  60
   61 ALVHSKMPSD IQRGIAMLEA LVVNDTSAMK LREKLYLLAL GYYRSGDFSR SRDCIERCLE 120
  121 VEPESGQAQA LKKAIEDRIV KDGVIGVGIA VTAVGVVAGI AAAILRS

Type	Start	End	Confidence
Cytoplasmic	1	142	0.94
Transmembrane Helix	143	165	0.92
Non-Cytoplasmic	166	167	0.90