YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|7576194, gi\|1...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPFPLSLIF GKKKRRRDDE IRRQKPTLKG VMTAFFATEA AICLLLLAGI SLTGTAVALF  60
   61 ASMPLFLVFS PVLVPAGIAT TILASGLMAG GTSGVSGLTI LMWLYKKYTG RDFPIKIPGA 120
  121 AAAGGAAPAA PAAPAPAAPA AKPAAKPAAK PGA

Type	Start	End	Confidence
Cytoplasmic	1	31	0.96
Transmembrane Helix	32	61	0.78
Non-Cytoplasmic	62	77	0.65
Transmembrane Helix	78	104	0.84
Cytoplasmic	105	153	0.53